Updated on 2024/04/16

写真a

 
Hamada Shun
 
Organization
Graduate Faculty of Interdisciplinary Research Faculty of Medicine Basic Science for Clinical Medicine (Biochemistry 1) Assistant Professor
Title
Assistant Professor

Research History

  • 東京大学医科学研究所   神経ネットワーク分野   特任研究員

    2010.4 - 2015.2

  • 東京大学医科学研究所   神経ネットワーク分野   特任研究員

    2010.4 - 2015.2

Education

  • The University of Tokyo

    2006.4 - 2010.3

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    Country: Japan

    Course: Doctor course

  • The University of Tokyo   医学系研究科   脳神経医学専攻

    2006.4 - 2010.3

  • Chiba University

    2004.4 - 2006.3

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    Country: Japan

    Course: Master course

  • Chiba University   自然科学研究科   生命・地球科学専攻

    2004.4 - 2006.3

  • Chiba University

    2000.4 - 2004.3

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    Country: Japan

  • Chiba University   理学部   生物学科

    2000.4 - 2004.3

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Degree

  • 博士(医学) ( 2010.3   東京大学 )

Research Areas

  • Life Science / Neuroscience-general

  • Life Science / Neuroscience-general  / Neurophysiology/General neuroscience

  • Life Science / Neuroscience-general

Research Interests

  • Active zone, CAST/ELKS

  • Active zone, CAST/ELKS

Subject of research

  • Analysis of the function of the phosphorylation of CAST/ELKS

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    2015.03.01

Research Projects

  • AMPKファミリーSIK3のシナプス局在・機能制御メカニズムの解明

    2022.7 - 2027.5

    公益財団法人 武田科学振興財団  医学系研究助成  研究助成

    濱田 駿

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    Authorship:Principal investigator  Type of fund::Others

Papers

  • A light-controlled phospholipase C for imaging of lipid dynamics and controlling neural plasticity Reviewed

    Yeon-Jeong Kim, Suguru Tohyama, Takashi Nagashima, Masashi Nagase, Yamato Hida, Shun Hamada, Ayako M. Watabe, Toshihisa Ohtsuka

    Cell Chemical Biology   2024.4( ISSN:2451-9456 )

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Elsevier BV  

    DOI: 10.1016/j.chembiol.2024.03.001

  • All-optical presynaptic plasticity induction by photoactivated adenylyl cyclase targeted to axon terminals Reviewed Major achievement

    Masashi Nagase, Takashi Nagashima, Shun Hamada, Mieko Morishima, Suguru Tohyama, Fumiko Arima-Yoshida, Kanae Hiyoshi, Tomoha Hirano, Toshihisa Ohtsuka, Ayako M. Watabe

    Cell Reports Methods   100740 - 100740   2024.3( ISSN:2667-2375 )

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Elsevier BV  

    DOI: 10.1016/j.crmeth.2024.100740

  • Experience‑dependent changes in affective valence of taste in male mice Reviewed Major achievement

    Shun Hamada, Kaori Mikami, Shuhei Ueda, Masashi Nagase, Takashi Nagashima, Mikiyasu Yamamoto, Haruhiko Bito, Sayaka Takemoto‑Kimura, Toshihisa Ohtsuka and Ayako M. Watabe

    Molecular Brain   16 ( 28 )   28 - 28   2023.3

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:BMC  

    Taste plays an essential role in the evaluation of food quality by detecting potential harm and benefit in what animals are about to eat and drink. While the affective valence of taste signals is supposed to be innately determined, taste preference can also be drastically modified by previous taste experiences of the animals. However, how the experience-dependent taste preference is developed and the neuronal mechanisms involved in this process are poorly understood. Here, we investigate the effects of prolonged exposure to umami and bitter tastants on taste preference using two-bottle tests in male mice. Prolonged umami exposure significantly enhanced umami preference with no changes in bitter preference, while prolonged bitter exposure significantly decreased bitter avoidance with no changes in umami preference. Because the central amygdala (CeA) is postulated as a critical node for the valence processing of sensory information including taste, we examined the responses of cells in the CeA to sweet, umami, and bitter tastants using in vivo calcium imaging. Interestingly, both protein kinase C delta (Prkcd)-positive and Somatostatin (Sst)-positive neurons in the CeA showed an umami response comparable to the bitter response, and no difference in cell type-specific activity patterns to different tastants was observed. Meanwhile, fluorescence in situ hybridization with c-Fos antisense probe revealed that a single umami experience significantly activates the CeA and several other gustatory-related nuclei, and especially CeA Sst-positive neurons were strongly activated. Intriguingly, after prolonged umami experience, umami tastant also significantly activates the CeA neurons, but the Prkcd-positive neurons instead of Sst-positive neurons were highly activated. These results suggest a relationship between amygdala activity and experience-dependent plasticity developed in taste preference and the involvement of the genetically defined neural populations in this process.

    DOI: 10.1186/s13041-023-01017-x

    PubMed

  • A novel technique for large-fragment knock-in animal production without ex vivo handling of zygotes Reviewed

    Manabu Abe, Ena Nakatsukasa, Rie Natsume, Shun Hamada, Kenji Sakimura, Ayako M Watabe, Toshihisa Ohtsuka

    Scientific Reports   13 ( 2245 )   2245 - 2245   2023.2( ISSN:2045-2322 )

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    Language:English   Publishing type:Research paper (scientific journal)  

    CRISPR/Cas-based genome editing has dramatically improved genetic modification technology. In situ electroporation called genome editing via oviductal nucleic acid delivery (GONAD), which eliminates the need for ex vivo embryo handling, is technically the simplest method for gene transfer and can be performed in laboratories without developmental engineering expertise including micromanipulation techniques. However, the use of this method remains challenging in the case of large-fragment knock-in, such as gene expression cassettes. Adeno-associated viruses (AAV) act as donor DNA for homologous recombination in infected cells, including rodent embryos. In this study, we demonstrated simultaneous electroporation of AAV donors and CRISPR/Cas9 components into embryos to create knock-in animals, and successfully generated knock-in rats carrying a gene cassette with a length of 3.0 kb using a small number of animals and in situ electroporation. These findings indicate that this technique is an efficient high-throughput strategy for producing genetically modified rodents and may be applicable to other animal species.

    DOI: 10.1038/s41598-023-29468-1

    PubMed

  • An engineered channelrhodopsin optimized for axon terminal activation and circuit mapping Reviewed Major achievement

    Shun Hamada, Masashi Nagase, Tomohiko Yoshizawa, Akari Hagiwara, Yoshikazu Isomura, Ayako M. Watabe, Toshihisa Ohtsuka

    Communications Biology   4 ( 1 )   461   2021.4( ISSN:2399-3642  eISSN:2399-3642 )

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Springer Nature  

    <title>Abstract</title>Optogenetic tools such as channelrhodopsin-2 (ChR2) enable the manipulation and mapping of neural circuits. However, ChR2 variants selectively transported down a neuron’s long-range axonal projections for precise presynaptic activation remain lacking. As a result, ChR2 activation is often contaminated by the spurious activation of <italic>en passant</italic> fibers that compromise the accurate interpretation of functional effects. Here, we explored the engineering of a ChR2 variant specifically localized to presynaptic axon terminals. The metabotropic glutamate receptor 2 (mGluR2) C-terminal domain fused with a proteolytic motif and axon-targeting signal (mGluR2-PA tag) localized ChR2-YFP at axon terminals without disturbing normal transmission. mGluR2-PA-tagged ChR2 evoked transmitter release in distal projection areas enabling lower levels of photostimulation. Circuit connectivity mapping in vivo with the Spike Collision Test revealed that mGluR2-PA-tagged ChR2 is useful for identifying axonal projection with significant reduction in the polysynaptic excess noise. These results suggest that the mGluR2-PA tag helps actuate trafficking to the axon terminal, thereby providing abundant possibilities for optogenetic experiments.

    DOI: 10.1038/s42003-021-01977-7

    Other Link: http://www.nature.com/articles/s42003-021-01977-7

  • Development of an L-type Ca 2+ channel-dependent Ca 2+ transient during the radial migration of cortical excitatory neurons Reviewed

    Shin-Ichiro Horigane, Shun Hamada, Satoshi Kamijo, Hirokazu Yamada, Miwako Yamasaki, Masahiko Watanabe, Haruhiko Bito, Toshihisa Ohtsuka, Sayaka Takemoto-Kimura

    NEUROSCIENCE RESEARCH   2020.6( ISSN:0168-0102 )

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    Language:English   Publishing type:Research paper (scientific journal)  

  • Double deletion of the active zone proteins CAST/ELKS in the mouse forebrain causes high mortality of newborn pups Reviewed

    Akari Hagiwara, Shun Hamada, Yamato Hida, Toshihisa Ohtsuka

    Molecular Brain   13 ( 1 )   2020.1( ISSN:1756-6606  eISSN:1756-6606 )

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Springer Science and Business Media LLC  

    DOI: 10.1186/s13041-020-0557-x

    Other Link: http://link.springer.com/article/10.1186/s13041-020-0557-x/fulltext.html

  • VPS13D-related disorders presenting as a pure and complicated form of hereditary spastic paraplegia Reviewed

    Kishin Koh, Hiroyuki Ishiura, Haruo Shimazaki, Michiko Tsutsumiuchi, Yuta Ichinose, Haitian Nan, Shun Hamada, Toshihisa Ohtsuka, Shoji Tsuji, Yoshihisa Takiyama

    Molecular Genetics & Genomic Medicine   e1108   2019.12( ISSN:2324-9269 )

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    Language:English   Publishing type:Research paper (scientific journal)  

    BACKGROUND: Alterations of vacuolar protein sorting-associated protein 13 (VPS13) family members including VPS13A, VPS13B, and VPS13C lead to chorea acanthocytosis, Cohen syndrome, and parkinsonism, respectively. Recently, VPS13D mutations were identified as a cause of VPS13D-related movement disorders, which show several phenotypes including chorea, dystonia, spastic ataxia, and spastic paraplegia. METHODS: We applied whole-exome analysis for a patient with a complicated form of hereditary spastic paraplegia (HSP) and her unaffected parents. Then, we screened the candidate genes in 664 Japanese families with HSP in Japan. RESULTS: We first found a compound heterozygote VPS13D mutation and a heterozygote ABHD4 variation in a sporadic patient with spastic paraplegia. Then, we found three patients with VPS13D mutations in two Japanese HSP families. The three patients with homozygous mutations (p.Thr1118Met/p.Thr1118Met and p.Thr2945Ala/p.Thr2945Ala) in the VPS13D showed an adult onset pure form of HSP. Meanwhile, the patient with a compound heterozygous mutation (p.Ser405Arg/p.Arg3141Ter) in the VPS13D showed a childhood onset complicated form of HSP associated with cerebellar ataxia, cervical dystonia, cataracts, and chorioretinal dystrophy. CONCLUSION: In the present study, we found four patients in three Japanese families with novel VPS13D mutations, which may broaden the clinical and genetic findings for VPS13D-related disorders.

    DOI: 10.1002/mgg3.1108

    PubMed

  • UBAP1 mutations cause juvenile-onset hereditary spastic paraplegias (SPG80) and impair UBAP1 targeting to endosomes Reviewed

    Haitian Nan, Yuta Ichinose, Masaki Tanaka, Kishin Koh, Hiroyuki Ishiura, Jun Mitui, Heisuke Mizukami, Masafumi Morimoto, Shun Hamada, Toshihisa Ohtsuka, Shoji Tsuji, Yoshihisa Takiyama

    JOURNAL OF HUMAN GENETICS   64 ( 11 )   1055 - 1065   2019.9( ISSN:1434-5161 )

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    Language:English   Publishing type:Research paper (scientific journal)  

    We aimed to find a new causative gene and elucidate the molecular mechanisms underlying a new type of hereditary spastic paraplegia (HSP). Patients with HSP were recruited from the Japan Spastic Paraplegia Research Consortium (JASPAC). Exome sequencing of genomic DNA from patients in four families was carried out, followed by Sanger sequencing of the UBAP1 gene. A mouse homolog of one UBAP1 frameshift mutation carried by one of the patients was created as a disease model. Functional properties of the UBAP1 wild type and UBAP1-mutant in mouse hippocampus neurons were examined. We identified three novel heterozygous loss of function mutations (c.425_426delAG, c.312delC, and c.535G>T) in the UBAP1 gene as the genetic cause of a new type of HSP (SPG80). All the patients presented identical clinical features of a pure type of juvenile-onset HSP. Functional studies on mouse hippocampal neurons revealed that the C-terminal deletion UBAP1-mutant of our disease model had lost its ability to bind ubiquitin in vitro. Overexpression of the UBAP1 wild type interacts directly with ubiquitin on enlarged endosomes, while the UBAP1-mutant cannot be recruited to endosome membranes. Our study demonstrated that mutations in the UBAP1 gene cause a new type of HSP and elucidated its pathogenesis. The full-length UBAP1 protein is involved in endosomal dynamics in neurons, while loss of UBAP1 function may perturb endosomal fusion and sorting of ubiquitinated cargos. These effects could be more prominent in neurons, thereby giving rise to the phenotype of a neurodegenerative disease such as HSP.

    DOI: 10.1038/s10038-019-0670-9

    PubMed

  • CAST: Its molecular structure and phosphorylation-dependent regulation of presynaptic plasticity Reviewed Major achievement

    Shun Hamada, Ohtsuka Toshihisa

    NEUROSCIENCE RESEARCH   127   25 - 32   2018.2( ISSN:0168-0102 )

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    Authorship:Lead author   Language:English   Publishing type:(MISC) Introduction and explanation (scientific journal)   Publisher:Elsevier BV  

    DOI: 10.1016/j.neures.2017.12.005

  • SAD-B Phosphorylation of CAST Controls Active Zone Vesicle Recycling for Synaptic Depression Reviewed

    Sumiko Mochida, Yamato Hida, Shota Tanifuji, Akari Hagiwara, Shun Hamada, Manabu Abe, Huan Ma, Misato Yasumura, Isao Kitajima, Kenji Sakimura, Toshihisa Ohtsuka

    Cell Reports   16 ( 11 )   2901 - 2913   2016.9( ISSN:2211-1247 )

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:CELL PRESS  

    Short-term synaptic depression (STD) is a common form of activity-dependent plasticity observed widely in the nervous system. Few molecular pathways that control STD have been described, but the active zone (AZ) release apparatus provides a possible link between neuronal activity and plasticity. Here, we show that an AZ cytomatrix protein CAST and an AZ-associated protein kinase SAD-B coordinately regulate STD by controlling reloading of the AZ with release-ready synaptic vesicles. SAD-B phosphorylates the N-terminal serine (S45) of CAST, and S45 phosphorylation increases with higher firing rate. A phosphomimetic CAST (S45D) mimics CAST deletion, which enhances STD by delaying reloading of the readily releasable pool (RRP), resulting in a pool size decrease. A phospho-negative CAST (S45A) inhibits STD and accelerates RRP reloading. Our results suggest that the CAST/SAD-B reaction serves as a brake on synaptic transmission by temporal calibration of activity and synaptic depression via RRP size regulation.

    DOI: 10.1016/j.celrep.2016.08.020

    Web of Science

  • The glutamate receptor GluN2 subunit regulates synaptic trafficking of AMPA receptors in the neonatal mouse brain Reviewed Major achievement

    Hamada S, Ogawa I, Yamasaki M, Kiyama Y, Kassai H, Watabe AM, Nakao K, Watanabe M, Manabe T

    EUROPEAN JOURNAL OF NEUROSCIENCE   40 ( 8 )   3136 - 3146   2014.10( ISSN:0953-816X  eISSN:1460-9568 )

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Federation of European Neuroscience Societies and John Wiley & Sons Ltd  

    The N-methyl-d-aspartate receptor (NMDAR) plays various physiological and pathological roles in neural development, synaptic plasticity and neuronal cell death. It is composed of two GluN1 and two GluN2 subunits and, in the neonatal hippocampus, most synaptic NMDARs are GluN2B-containing receptors, which are gradually replaced with GluN2A-containing receptors during development. Here, we examined whether GluN2A could be substituted for GluN2B in neural development and functions by analysing knock-in (KI) mice in which GluN2B is replaced with GluN2A. The KI mutation was neonatally lethal, although GluN2A-containing receptors were transported to the postsynaptic membrane even without GluN2B and functional at synapses of acute hippocampal slices of postnatal day 0, indicating that GluN2A-containing NMDARs could not be substituted for GluN2B-containing NMDARs. Importantly, the synaptic -amino-3-hydroxy-5-methyl-4-isoxazole propionic acid receptor (AMPAR) subunit GluA1 was increased, and the transmembrane AMPAR regulatory protein, which is involved in AMPAR synaptic trafficking, was increased in KI mice. Although the regulation of AMPARs by GluN2B has been reported in cultured neurons, we showed here that AMPAR-mediated synaptic responses were increased in acute KI slices, suggesting differential roles of GluN2A and GluN2B in AMPAR expression and trafficking in vivo. Taken together, our results suggest that GluN2B is essential for the survival of animals, and that the GluN2B-GluN2A switching plays a critical role in synaptic integration of AMPARs through regulation of GluA1 in the whole animal.

    DOI: 10.1111/ejn.12682

    Web of Science

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Books and Other Publications

  • ELKSによる脳―末梢分泌システムの制御機構

    濱田駿、大塚稔久( Role: Joint Work)

    公益財団法人金原一郎医学医療振興財団  2021.10 

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    Language:Japanese  

  • ELKSによる脳―末梢分泌システムの制御機構

    濱田駿, 大塚稔久( Role: Joint Work)

    公益財団法人金原一郎医学医療振興財団  2021.10 

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    Language:Japanese  

Presentations

  • Optogenetic Control of Basolateral Amygdala Plasticity and Fear Memory Formation via Engineered Phospholipase C International conference

    Yeon-Jeong Kim, Suguru Tohyama, Takashi Nagashima, Masashi Nagase, Yamato Hida, Shun Hamada, Ayako M Watabe, Toshihisa Ohtsuka

    Neuronal Circuits: the tenth Cold Spring Harbor conference  2024.3 

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    Event date: 2024.3

    Language:English   Presentation type:Poster presentation  

    Venue:Long Island, NY   Country:United States  

  • Optogenetic engineering of light-controlled phospholipase C: metabolic dynamics of phosphatidylinositide

    Yeon-Jeong Kim, Shun Hamada, Toshihisa Otsuka

    Molecular and Cellular Biology of Lipids Gordon Research Conference  2023.7 

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    Language:English   Presentation type:Poster presentation  

    Venue:Waterville Valley, New Hampshire   Country:United States  

  • 光駆動型ホスホリパーゼCによるホスファチジルイノシトール動態の可視化

    金 然正, 濱田 駿, 大塚 稔久

    第65回 日本脂質生化学会  2023.6 

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    Language:Japanese   Presentation type:Oral presentation(general)  

    Venue:熊本   Country:Japan  

  • 小脳顆粒細胞特異的 Liver Kinase B(LKB1)欠損マウスの週齢変化に伴う運動機能障害 International conference

    喜多村 まゆ、萩原 明、浜田 駿、大塚 稔久

    Neuro2022  2022.6 

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    Event date: 2022.6

    Language:Japanese   Presentation type:Poster presentation  

  • An engineered channelrhodopsin optimized for axon terminal activation and circuit mapping International conference Major achievement

    Shun Hamada, Masashi Nagase, Tomohiko Yoshizawa, Akari Hagiwara, Yoshikazu Isomura, Ayako M. Watabe, Toshihisa Ohtsuka

    The 44th annual Meeting of the Japan Neuroscience Society  2021.7 

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    Event date: 2021.7

    Language:English   Presentation type:Poster presentation  

  • ストレス中枢におけるCAST/ELKSファミリーの発現解析 Major achievement

    浜田 駿

    2020年度 シナプス研究会  2020.12  生理学研究所

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    Event date: 2020.12

    Language:Japanese   Presentation type:Poster presentation  

    Venue:オンライン開催(Zoom)  

  • 神経細胞における光活性化アデニル酸シクラーゼbPACを用いたcAMP依存性PKA活性の検討

    平野 知葉, 浜田 駿, 萩原 明, 永嶋 宇, 永瀬 将志, 渡部 文子, 大塚 稔久

    第43回日本神経科学大会  2020.7 

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    Event date: 2020.7

    Language:Japanese   Presentation type:Poster presentation  

    Venue:神戸  

  • Biochemical analysis of dynamic changes for expression and function of active zone proteins CAST and ELKS during reward-related activities Major achievement

    Shun Hamada, Toshihisa Ohtsuka

    The 41th Annual Meeting of the Japan Neuroscience Society  2018.7 

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    Event date: 2018.7

    Language:English   Presentation type:Poster presentation  

  • Biochemical analysis of phosphorylated CAST/ELKS in mice brain Major achievement

    Shun Hamada, Manabu Abe, Kenji Sakimura, Toshihisa Ohtsuka

    The 40th Annual Meeting of the Japan Neuroscience Society  2017.7 

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    Event date: 2017.7

    Language:English   Presentation type:Poster presentation  

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Industrial Property Rights

  • キメラタンパク質

    金 然正、大塚 稔久、濱田 駿

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    Applicant:国立大学法人山梨大学

    Application no:2023-36623  Date applied:2023.3

Teaching Experience (On-campus)

  • 生化学実習

    2022Year  Type of subject:Professional education (undergraduate)

  • チュートリアル講義

    2017Year  Type of subject:Professional education (undergraduate)

  • 生化学実習

    2017Year  Type of subject:Professional education (undergraduate)

  • チュートリアル講義

    2016Year  Type of subject:Professional education (undergraduate)

  • 生化学実習

    2016Year  Type of subject:Professional education (undergraduate)

Guidance results

  • 2021

    Type:Achievement of student guidance (Undergraduate)

    Number of people receiving guidance :4people 

Social Activities

  • サイエンスキャッスル2018関東大会

    株式会社リバネス  サイエンスキャッスル2018関東大会  2018.12

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    Audience: Junior students, High school students

    Type:Other

    中学・高校の理系の部活の研究成果を発表する学会において、そのポスター発表の審査員を行った。

  • サイエンスキャッスル2017関東大会

    Role(s): Organizing member

    株式会社リバネス  サイエンスキャッスル2017関東大会  東京都  2017.12

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    Audience: Junior students, High school students

    Type:Seminar, workshop

    中高生の研究を発表する学会において、ポスター発表審査員を行った。

  • サイエンスキャッスル2017関東大会

    Role(s): Organizing member

    株式会社リバネス  サイエンスキャッスル2017関東大会  東京都  2017.12

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    Audience: Junior students, High school students

    Type:Seminar, workshop

    中高生の研究を発表する学会において、ポスター発表審査員を行った。

  • サイエンスキャッスル2016 関東大会 ポスター審査員

    Role(s): Organizing member

    株式会社リバネス  サイエンスキャッスル2016 関東大会  TEPIA 先端技術館  2016.12

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    Audience: High school students

    Type:Other

    高校生の科学系の部活動の研究発表を行う学会において、そのポスター発表の審査員を行った。

  • サイエンスキャッスル2016 関東大会 ポスター審査員

    Role(s): Organizing member

    株式会社リバネス  サイエンスキャッスル2016 関東大会  TEPIA 先端技術館  2016.12

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    Audience: High school students

    Type:Other

    高校生の科学系の部活動の研究発表を行う学会において、そのポスター発表の審査員を行った。